PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK28169.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WRKY
Protein Properties Length: 201aa    MW: 22959.1 Da    PI: 5.3129
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK28169.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.84.6e-28109167159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +dDgy+WrKYG+K+vk++++ r+YY+C+s++C+vkk+ver+ +d  +v++tYeg Hnhe
  KFK28169.1 109 MDDGYKWRKYGKKSVKNNTNKRNYYKCSSESCMVKKRVERDGDDAAYVITTYEGVHNHE 167
                 59********************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-3096169IPR003657WRKY domain
SuperFamilySSF1182901.83E-26101169IPR003657WRKY domain
PROSITE profilePS5081128.61104169IPR003657WRKY domain
SMARTSM007741.8E-31109168IPR003657WRKY domain
PfamPF031063.8E-22110167IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MNMPQNPNPN FTFYSDENFV NPFMDTYDFT NLMFDFDEGV NTTNNGLIEE ETSSPTSMVS  60
SETFTGESGG SGNAITTLSR NESTGSKEVE TKEMGHRVAF RTRSKIDVMD DGYKWRKYGK  120
KSVKNNTNKR NYYKCSSESC MVKKRVERDG DDAAYVITTY EGVHNHESPS HVYYNDMVLS  180
YDHGNWNQHS LRQSIQISPP P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A5e-2399170778Probable WRKY transcription factor 4
1wj2_A5e-2399170778Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB4938131e-154AB493813.1 Arabidopsis thaliana At5g64810 mRNA for hypothetical protein, partial cds, clone: RAAt5g64810.
GenBankAF4262521e-154AF426252.1 Arabidopsis thaliana WRKY transcription factor 51 (WRKY51) mRNA, complete cds.
GenBankBT0257551e-154BT025755.1 Arabidopsis thaliana At5g64810 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006394110.11e-123hypothetical protein EUTSA_v10004930mg
SwissprotQ93WU91e-111WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBLA0A087GE671e-151A0A087GE67_ARAAL; Uncharacterized protein
STRINGfgenesh2_kg.8__2513__AT5G64810.11e-111(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM57112747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-101WRKY DNA-binding protein 51